Lyric of the day: "Oo oo that Smell!"
If you used vinyl-lined hose specified for waste systems there should not be any permeation at all. Like, zero. Same for an intact roto-molded plastic tank from Ronco.
As has been pointed out, connections are usually the weak point in the system. Ours are all double clamped on the pressure side, and single clamped on the suction side.
If you still have the original Whale Gusher pump with the yellow painted body for offshore pump outs, it can let odor past/thru the top diaphragm, and there is a superior all-plastic version waste pump you can replace it with. Mounting holes are different but the main opening for the handle is still useable. That's what I did.
Next, you have GOT to "deep clean" he hull under the head compartment counter and under the holding tank. It takes more than one or two wipe-downs. Use a cleaner with bleach, and scrub all surfaces with that stuff and hot water on a wrung-out rag. Repeat.
Wipe it dry and check for residual odor the next day.
We found that the prior owner had somehow ignored leaks/seeps for several years, and even tho these inside hull surfaces had been gel coated at the factory, the porous surface (like all gel coat) and had absorbed a whiff of something unpleasant.
As a final step, install ventilation for all of the boat's inside spaces. While mold and mildew are not the same level of threat, they do have their own odor. Keeping air flowing and allowing condensation to evaporate out of enclosed space is vital for boat interiors no matter what brand or model.
Good luck to you.
Addendum: like another poster we also installed an overhead vent in the cabin top many years ago. We went with the SS version of the Beckson vent-o-mate. Great product.